Computational Biology
Bioinformatics & Genomics
Advanced computational tools and services for fungal genomics, strain characterization, and biological data analysis
45,000+
Fungal ITS Database
Curated reference sequences
2.4M+
Expression Atlas
Transcriptomic profiles
847+
Cultivation Metadata
Linked phenotype data
1,200+
Strain Library
Characterized genetics
Genomics Services
From sequencing to insights—comprehensive bioinformatics capabilities
Strain Identification & Typing
ITS sequencing and phylogenetic analysis for accurate species and strain identification
ITS barcodingPhylogenetic analysisStrain librariesContamination ID
Comparative Genomics
Whole genome sequencing and analysis for strain improvement and trait discovery
WGS analysisSNP callingGene annotationPathway mapping
Expression Analysis
Transcriptomic profiling for understanding gene expression under cultivation conditions
RNA-seqDifferential expressionCo-expression networksFunctional enrichment
Bioinformatics Pipelines
Custom computational workflows for mycological data analysis and integration
Custom pipelinesCloud computeData integrationVisualization
Developer Tools
Purpose-built tools for biological data analysis
Synapse-lang
Express Research in Code
Synapse-lang is a domain-specific language designed for biological research workflows. Express complex genomic analyses with intuitive syntax.
Learn Synapse-lang// Fungal ITS Analysis Pipeline
pipeline its_analysis {
input: sequences.fasta
step align {
tool: mafft
params: --auto
}
step identify {
tool: blast
database: fungal_its_db
threshold: 97%
}
step annotate {
model: crowe-taxonomy
output: species_calls.tsv
}
}Start Analyzing
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